Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTGCTGAGGTGTCAGGC
.((((((((.....(((((((.&)))))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017007799
GeneSymbolJAKMIP1
Binding site1530,1550
Score0.923
Seed1
Au0.5
Energy-19.7
Binding len20
Me-13.353
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure