Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTGCAGAAAGGGGCCT
....(((((((((((((((...&))).)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_017009071
GeneSymbolNKX2-5
Binding site604,621
Score0.923
Seed0
Au0.279
Energy-23.7
Binding len17
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure