Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATTTTAATTGTTGGCCAGGC
.((((((..(((((..(((((.&)))))..)))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017009991
GeneSymbolTRIM52
Binding site4310,4331
Score0.846
Seed1
Au0.632
Energy-19.9
Binding len21
Me-8.132
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure