Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACCTGGTACACACGGGAGAAAAGCCACATGAATGCCAGGTC
(((((((((.(.((((......&.))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017011187
GeneSymbolPRDM1
Binding site1949,1992
Score1.0
Seed1
Au0.485
Energy-17.9
Binding len17
Me-8.527
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure