Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCTGAATGAGTGTGGGGGCCAGTGG
((((((((((((((.(((((..&)))))))).......))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_017011367
GeneSymbolTTBK1
Binding site6889,6916
Score0.923
Seed1
Au0.412
Energy-25.9
Binding len27
Me-4.673
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure