Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATGTGCATCTTCAAATGCAGCATCCTGTGCCAGGTG
((((((((((..((((......&.))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017012183
GeneSymbolITGB8
Binding site172,210
Score0.897
Seed1
Au0.471
Energy-21.1
Binding len18
Me-10.109
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure