Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACGCAGTGAATTTCGGAAGCAGCCAGTGG
((((((((.(((((((.((...&)).))).........)))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001042546
GeneSymbolATPAF1
Binding site407,436
Score0.846
Seed1
Au0.5
Energy-21.1
Binding len29
Me-4.994
Phylopstem0.24501050000000002
Phylopflank0.27708415875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure