Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAAAGGAGCACATGTGG
((((((((((((..(((((...&)))))))))))).)).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001042550
GeneSymbolSMC2
Binding site3839,3859
Score1.0
Seed1
Au0.632
Energy-22.9
Binding len20
Me-6.084
Phylopstem0.6648189192857145
Phylopflank0.7303939402500002
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure