Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTACGGTGAGGACTGGAGGGGGGCCGGTT
.((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001042646
GeneSymbolTRAK1
Binding site2966,2995
Score1.0
Seed1
Au0.397
Energy-26.4
Binding len18
Me-3.793
Phylopstem1.8284228875
Phylopflank1.172816835
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure