Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGAGGGGTGGACGCCCCTGGCCCCCAGTCCCCGGCCTGCGGAGGGGGCCGGTGG
(((((((((((((((((((...&.))))).)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001042678
GeneSymbolRHOC
Binding site103,159
Score0.923
Seed1
Au0.118
Energy-30.6
Binding len22
Me-3.938
Phylopstem0.08595466999999998
Phylopflank0.66290534875
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure