Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGGACTGCATTGTTTTCTAGCCCCGAGGTGGTGG
(((((.(((..((((((((((.&))))))))))....................))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001042679
GeneSymbolRHOC
Binding site880,920
Score0.846
Seed0
Au0.338
Energy-22.4
Binding len40
Me-9.906
Phylopstem5.566424
Phylopflank5.613954809999999
Longest consecutive pairings10
Position of longest consecutive pairings30
Pairings in 3prime end7
Position3UTR
2D Structure