Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTTCCTGCCAGGA
.(((((((......((((....&))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001042682
GeneSymbolRERE
Binding site5307,5323
Score0.846
Seed1
Au0.368
Energy-16.2
Binding len16
Me-14.41
Phylopstem2.457055857142857
Phylopflank5.07971898125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure