Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCGGGAAGCTCAAGGGCTGAGAGGGAGCCGCTGC
((.((((((((((((((((...&))))))))................)))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001042683
GeneSymbolSHPRH
Binding site308,344
Score0.846
Seed0
Au0.309
Energy-23.7
Binding len36
Me-5.495
Phylopstem0.19783365937499997
Phylopflank0.34774990875000006
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end5
Position5UTR
2D Structure