Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGTCCCTTAAGTTCAGGTCGGAGGAGCGGCCGGTGA
((((((((.((((((((((((.&))).))).............)))).)).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001042690
GeneSymbolMSANTD1
Binding site643,680
Score0.846
Seed1
Au0.397
Energy-20.9
Binding len37
Me-4.994
Phylopstem3.051669111111111
Phylopflank2.5933374149999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure