Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGTAGGGGCCT
....(((((((((((((((...&))))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001042729
GeneSymbolFGR
Binding site178,196
Score0.859
Seed0
Au0.368
Energy-25.0
Binding len18
Me-9.547
Phylopstem0.020785364705882367
Phylopflank-0.10795544499999998
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position5UTR
2D Structure