Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGCTGGCCCCTTCCCTGCCTGCTGTC
..(((((..((((((((((((&))))))))))))...............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346324
GeneSymbolATG13
Binding site2369,2402
Score1.0
Seed0
Au0.382
Energy-22.0
Binding len33
Me-8.327
Phylopstem0.40499100000000005
Phylopflank0.6493938674999998
Longest consecutive pairings12
Position of longest consecutive pairings21
Pairings in 3prime end8
Position3UTR
2D Structure