Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTCCCTTTAGAAGAGATTATGGGTGAAGAAGGGAGGGGCCTGAGAGATTATAGTGA
((((((((((((((((((((((&)))).)))........................)))))))))))...........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001043352
GeneSymbolTPM3
Binding site1026,1085
Score0.923
Seed1
Au0.559
Energy-23.0
Binding len59
Me-3.938
Phylopstem1.7887557362068967
Phylopflank1.2389459012499997
Longest consecutive pairings11
Position of longest consecutive pairings16
Pairings in 3prime end8
Position3UTR
2D Structure