Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAATGGGTCCTTCTGACTGGGTGG
(((((((((.(((((((((...&))))))))).)))))..........)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001043353
GeneSymbolTPM3
Binding site1228,1258
Score1.0
Seed1
Au0.485
Energy-21.8
Binding len30
Me-5.18
Phylopstem0.8937237222222222
Phylopflank1.0712155487500001
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end5
Position3UTR
2D Structure