Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCCAGGTGGAGAAAAGGAGACTTCGGCTACCCAGAGAAGTTCAGTGC
((((((((..(((((((((((.&.)))))))))))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001044392
GeneSymbolMUC1
Binding site177,229
Score1.0
Seed1
Au0.544
Energy-25.3
Binding len22
Me-6.236
Phylopstem-0.4979656090909092
Phylopflank-0.10524403875
Longest consecutive pairings14
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure