Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGACTACAGGTGTGTGCCAGC
..((((((((((.(((((.(((&))))))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001048210
GeneSymbolCLCC1
Binding site3392,3413
Score0.846
Seed1
Au0.559
Energy-21.1
Binding len21
Me-6.246
Phylopstem1.1265435
Phylopflank1.1407646325
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure