Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGAGGAGGATGCCAGGC
.((((((((......((((...&))))......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047415792
GeneSymbolSH3TC1
Binding site1236,1255
Score0.846
Seed1
Au0.397
Energy-17.5
Binding len19
Me-14.089
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure