Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCGCGACAAGGGGCCCGCGCTTGCCAAGGCCGACGGGCAGGAGTGA
((((((((((((..((.(((((&))))).))..))))))))..........................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001048249
GeneSymbolSMIM15
Binding site170,219
Score0.846
Seed1
Au0.279
Energy-21.6
Binding len49
Me-6.084
Phylopstem0.0019198284210526393
Phylopflank0.23553384599999996
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end7
Position5UTR
2D Structure