Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGG
..(((((((((((((((.....&)))))))))).......................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001048252
GeneSymbolCTXN3
Binding site1097,1136
Score0.923
Seed1
Au0.603
Energy-20.6
Binding len39
Me-4.957
Phylopstem0.12668578421052631
Phylopflank0.13636613499999997
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end3
Position3UTR
2D Structure