Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCACTCCACCCAGAGTAGAGCCAGG
..(((((((..((((((((.((&.)).))))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001049
GeneSymbolSSTR1
Binding site2563,2590
Score0.923
Seed1
Au0.426
Energy-27.5
Binding len22
Me-9.024
Phylopstem-0.07038585000000001
Phylopflank0.14014584999999996
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure