Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTCGGGGTTCGGGGTTCGGTTGCAGGGCTG
((.((((((((((.(((((((&.)))..))))...)))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001049
GeneSymbolSSTR1
Binding site2842,2874
Score0.846
Seed0
Au0.309
Energy-27.8
Binding len26
Me-6.352
Phylopstem-0.4723786199999999
Phylopflank-0.4996006249999998
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure