Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGCGCAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001050
GeneSymbolSSTR2
Binding site6383,6406
Score0.923
Seed1
Au0.426
Energy-29.6
Binding len23
Me-10.109
Phylopstem-0.09524814727272729
Phylopflank-0.7349138424999999
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure