Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATGCAGAGAGGAACACGCGGGCCAGTGG
((((((((((((((((.((...&)).)))))))))........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001050
GeneSymbolSSTR2
Binding site5267,5295
Score0.923
Seed1
Au0.471
Energy-26.5
Binding len28
Me-3.938
Phylopstem0.006992366666666664
Phylopflank0.22010636875
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end4
Position3UTR
2D Structure