Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGCAGCCGCAGG
......((((((((((..(((&)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047415792
GeneSymbolSH3TC1
Binding site1326,1342
Score0.923
Seed0
Au0.456
Energy-22.6
Binding len16
Me-15.567
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure