Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&AGTGAGAGAGGAGCCATGG
((.((((((((((((.(.(...&).).)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001052
GeneSymbolSSTR4
Binding site2139,2158
Score1.0
Seed0
Au0.456
Energy-23.3
Binding len19
Me-5.728
Phylopstem-0.746129125
Phylopflank-0.2255850075
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure