Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCCCAAGACAATGAAAGTTTGCACTGTATGCTGGA
..((((((((((.(((((((((&.))))))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001066
GeneSymbolTNFRSF1B
Binding site3614,3651
Score1.0
Seed1
Au0.588
Energy-21.8
Binding len22
Me-6.246
Phylopstem0.36966869999999996
Phylopflank0.33616779700000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure