Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGAAGTGTCAGGA
.((((((((....(((((....&)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001076552
GeneSymbolACSS2
Binding site733,750
Score0.846
Seed1
Au0.441
Energy-17.7
Binding len17
Me-12.497
Phylopstem2.27133125
Phylopflank5.0648166825
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure