Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGACAAATGGATGCCAGTC
.(((((((((..(((((((...&))))))).....))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077197
GeneSymbolPDE11A
Binding site5214,5237
Score0.923
Seed1
Au0.647
Energy-25.0
Binding len23
Me-9.965
Phylopstem-0.34198067
Phylopflank0.22306519750000006
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure