Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCTCATCTGGAGGAACATTTAATATCTCTGTCAGTGG
(((((((((((((..(((((((&)))))))......))))))...............))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077207
GeneSymbolSEC31A
Binding site1728,1770
Score0.846
Seed1
Au0.588
Energy-22.7
Binding len42
Me-5.53
Phylopstem1.879039528571429
Phylopflank2.5561911585
Longest consecutive pairings7
Position of longest consecutive pairings35
Pairings in 3prime end7
PositionCDS
2D Structure