Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCTATGTGCTAGGC
.(((((((((....((((((..&))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001077244
GeneSymbolGRIA4
Binding site2974,2992
Score0.808
Seed1
Au0.574
Energy-19.1
Binding len18
Me-12.111
Phylopstem0.12588888888888888
Phylopflank0.9120375000000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure