Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTAGCGCAGCCGAGAAGCAGAGGTGCCAGG
..(((((.((((((((((((((&)))))))))..............))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077244
GeneSymbolGRIA4
Binding site170,205
Score0.846
Seed0
Au0.382
Energy-26.0
Binding len35
Me-7.271
Phylopstem0.1183750785714286
Phylopflank0.3985835925000001
Longest consecutive pairings9
Position of longest consecutive pairings26
Pairings in 3prime end8
Position5UTR
2D Structure