Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGGAGGTCCAGGTGG
((((((..((((((((((....&)))))))))).)))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077263
GeneSymbolTMPRSS13
Binding site2825,2844
Score0.923
Seed0
Au0.324
Energy-23.8
Binding len19
Me-7.795
Phylopstem2.06654601
Phylopflank1.424101023
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure