Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCGGAAAGGTGGTAGTTAAGAATTTGTAAAGGCCAGA
..(((((((((((((..(((((&)))))))))))).....................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077394
GeneSymbolDPH5
Binding site37,77
Score0.846
Seed1
Au0.544
Energy-19.7
Binding len40
Me-5.19
Phylopstem0.035005864705882364
Phylopflank0.14298922115625
Longest consecutive pairings12
Position of longest consecutive pairings28
Pairings in 3prime end6
Position5UTR
2D Structure