Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGAGGTCCACCAGAGGGCGCATGAAGCCCAGGCTGTTGCCAAACCCTACCCTGCCCCACACCAAGGAGCCAGC
..((((((((((...((((((.&.))))))......)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077399
GeneSymbolPNKD
Binding site516,591
Score0.923
Seed1
Au0.515
Energy-27.5
Binding len24
Me-7.838
Phylopstem2.1771847
Phylopflank-0.08956048900000008
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure