Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCCAGAGGGCAAGGAGGAACCTGAACCCCTATCCCCGGAGCTGGA
..((((((((((((((((.((.&)).))))))))............................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077399
GeneSymbolPNKD
Binding site151,199
Score0.923
Seed1
Au0.426
Energy-21.9
Binding len48
Me-4.957
Phylopstem1.279003447727273
Phylopflank2.4149257549999996
Longest consecutive pairings8
Position of longest consecutive pairings37
Pairings in 3prime end6
PositionCDS
2D Structure