Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACGCAGAACCCGGGAGTAGGA
..((.(((((((((((.(((((&))))).)))))...)))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077443
GeneSymbolHNRNPC
Binding site85,109
Score0.846
Seed0
Au0.426
Energy-22.6
Binding len24
Me-9.076
Phylopstem-0.11346154785714287
Phylopflank-0.011819125000000014
Longest consecutive pairings6
Position of longest consecutive pairings4
Pairings in 3prime end7
Position5UTR
2D Structure