Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGCCAGTCTCAGCCATTCTAGGAGTGAAGCAAAGGAGTCCAGTC
.((((((((((((((((.(((.&))).))))........................))))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077445
GeneSymbolJADE3
Binding site1866,1912
Score0.846
Seed1
Au0.426
Energy-23.8
Binding len46
Me-3.793
Phylopstem1.749855240731707
Phylopflank1.342380538375
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure