Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGACAACCTGGGCTGA
...(((((..(((((((((((&)))))).)))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346343
GeneSymbolMRRF
Binding site6217,6237
Score0.846
Seed0
Au0.456
Energy-22.6
Binding len20
Me-8.813
Phylopstem-0.5751847958333334
Phylopflank-0.12489577749999996
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure