Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCTCCTGAGTAGCTGGGACTGCAGCTATGCAC
.(((((((((((((.((((((&.))))..........)).))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346343
GeneSymbolMRRF
Binding site4099,4138
Score0.846
Seed1
Au0.5
Energy-21.9
Binding len34
Me-4.529
Phylopstem0.03876626666666668
Phylopflank-0.03133476250000001
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure