Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTACTGTGTGCCAGGC
.(((((((((((..((((((..&))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001077484
GeneSymbolSLC38A1
Binding site192,210
Score1.0
Seed1
Au0.618
Energy-25.7
Binding len18
Me-5.939
Phylopstem1.448341112727273
Phylopflank0.85475904275
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure