Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCACCAGATGATTCCTAGGACTCATGGTGCAACATACAGGAGCCAGG
..((((((((((((((((....&.))))))).................))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077484
GeneSymbolSLC38A1
Binding site5740,5788
Score0.923
Seed1
Au0.441
Energy-23.8
Binding len35
Me-4.957
Phylopstem0.4484982727272727
Phylopflank0.6356167637500002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure