Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGAAGGGGAGCAGGAGGAGAGGGAAGTAGTGG
((((((((((((((((((....&)))))))))).)))...............))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077527
GeneSymbolJRK
Binding site407,442
Score0.923
Seed1
Au0.324
Energy-23.5
Binding len35
Me-3.938
Phylopstem0.056885911764705865
Phylopflank0.098400425
Longest consecutive pairings10
Position of longest consecutive pairings25
Pairings in 3prime end4
Position5UTR
2D Structure