Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCACCCCAAACCTGGTCAGTTTGAGGGGAGCCGCTGC
((.(((((((((((..((((((&))))))....................))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077527
GeneSymbolJRK
Binding site108,149
Score0.923
Seed0
Au0.426
Energy-23.8
Binding len41
Me-6.464
Phylopstem0.2361405454545455
Phylopflank0.12555995000000003
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end6
Position5UTR
2D Structure