Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTCCAGAGCTGCAGTGCCACTGGAGGAGTCAGA
..(((((((((((...((((..&.))))...))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077628
GeneSymbolAPH1A
Binding site1526,1560
Score1.0
Seed1
Au0.412
Energy-22.1
Binding len20
Me-6.782
Phylopstem0.43144821818181817
Phylopflank1.7647578775
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure