Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAACCCATTTCAGCCTAGAGAGGGTGGTCAGTT
.((((((((((((((((((.((&.)).)))))))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077654
GeneSymbolTNFAIP8
Binding site2351,2386
Score0.923
Seed1
Au0.5
Energy-25.8
Binding len25
Me-3.793
Phylopstem-0.03372541449999995
Phylopflank0.278287141625
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure