Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAACTTTGGGAGGCGGA
..(((.(((((((((((((...&))))))))....))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001077654
GeneSymbolTNFAIP8
Binding site4072,4094
Score0.846
Seed0
Au0.456
Energy-24.9
Binding len22
Me-6.858
Phylopstem-0.2908693999999999
Phylopflank-0.023473839999999885
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure